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LOC107680407 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107680407, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107680407
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
See related
Ensembl:ENSSANG00000012490
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107680407 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015558617.1 (7114..28465)

NW_015558617.1Genomic Context describing neighboring genes Neighboring gene histo-blood group ABO system transferase-like Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015558617.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015558617.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    7114..28465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016476294.1 → XP_016331780.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X3

    UniProtKB/TrEMBL
    A0A671M108

  2. XM_016476293.1 → XP_016331779.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A671LUP4, A0A671M108
    Related
    ENSSANP00000024256.1, ENSSANT00000025834.1

  3. XM_016476295.1 → XP_016331781.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A671LY70, A0A671M108
    Related
    ENSSANP00000024260.1, ENSSANT00000025838.1

  4. XM_016476292.1 → XP_016331778.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A671M108
    Related
    ENSSANP00000024264.1, ENSSANT00000025842.1
Nucleotide Protein
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