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LOC107677008 lactosylceramide alpha-2,3-sialyltransferase-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107677008, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107677008
Gene description
lactosylceramide alpha-2,3-sialyltransferase-like
See related
Ensembl:ENSSANG00000049678
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107677008 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015557085.1 (1261..44365)

NW_015557085.1Genomic Context describing neighboring genes Neighboring gene lactosylceramide alpha-2,3-sialyltransferase-like Neighboring gene protein atonal homolog 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015557085.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015557085.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    1261..44365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016471784.1 → XP_016327270.1  lactosylceramide alpha-2,3-sialyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A671SYB6

  2. XM_016471785.1 → XP_016327271.1  lactosylceramide alpha-2,3-sialyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A671SYB6

  3. XM_016471787.1 → XP_016327273.1  lactosylceramide alpha-2,3-sialyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A671SYB6, A0A671SZ15
    Related
    ENSSANP00000101099.1, ENSSANT00000107321.1

  4. XM_016471786.1 → XP_016327272.1  lactosylceramide alpha-2,3-sialyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A671SYB6, A0A671SZ15
    Related
    ENSSANP00000101101.1, ENSSANT00000107323.1
Nucleotide Protein
Heading Accession and Version

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