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tmtc2b transmembrane O-mannosyltransferase targeting cadherins 2b [ Sinocyclocheilus anshuiensis ]

Gene ID: 107673141, updated on 14-Mar-2024

Summary

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Gene symbol
tmtc2b
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
zebrafish all
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Genomic context

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See tmtc2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015555737.1 (125719..246937, complement)

NW_015555737.1Genomic Context describing neighboring genes Neighboring gene bicaudal D homolog 1a Neighboring gene solute carrier family 23 member 4 Neighboring gene ras and EF-hand domain-containing protein homolog Neighboring gene protein arginine N-methyltransferase 8-B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015555737.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015555737.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    125719..246937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016466630.1 → XP_016322116.1  transmembrane and TPR repeat-containing protein 2-like isoform X2

  2. XM_016466628.1 → XP_016322114.1  transmembrane and TPR repeat-containing protein 2-like isoform X1

Nucleotide Protein
Heading Accession and Version

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