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LOC107671722 beta-1,3-galactosyltransferase 2-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107671722, updated on 14-Mar-2024

Summary

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Gene symbol
LOC107671722
Gene description
beta-1,3-galactosyltransferase 2-like
See related
Ensembl:ENSSANG00000005739
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
zebrafish all
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Genomic context

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See LOC107671722 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015555703.1 (1393830..1400231)

NW_015555703.1Genomic Context describing neighboring genes Neighboring gene phosphoribosyl transferase domain containing 1b Neighboring gene probable G-protein coupled receptor 158 Neighboring gene uncharacterized LOC107671744 Neighboring gene cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) Neighboring gene 60 kDa SS-A/Ro ribonucleoprotein-like Neighboring gene phospholipase ABHD3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015555703.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015555703.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    1393830..1400231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016464664.1 → XP_016320150.1  beta-1,3-galactosyltransferase 2-like isoform X1

    UniProtKB/TrEMBL
    A0A671KXU6
    Related
    ENSSANP00000010426.1, ENSSANT00000011171.1

  2. XM_016464665.1 → XP_016320151.1  beta-1,3-galactosyltransferase 2-like isoform X2

Nucleotide Protein
Heading Accession and Version

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