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LOC107666881 probable C-mannosyltransferase DPY19L1 [ Sinocyclocheilus anshuiensis ]

Gene ID: 107666881, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107666881
Gene description
probable C-mannosyltransferase DPY19L1
See related
Ensembl:ENSSANG00000013325
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107666881 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015552637.1 (2520070..2531033)

NW_015552637.1Genomic Context describing neighboring genes Neighboring gene homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein Neighboring gene T-box transcription factor TBX20-like Neighboring gene solute carrier family 4 member 7 Neighboring gene transfer RNA leucine (anticodon CAA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015552637.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015552637.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    2520070..2531033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016458390.1 → XP_016313876.1  probable C-mannosyltransferase DPY19L1 isoform X1

    UniProtKB/TrEMBL
    A0A671LZ90, A0A671M5L1
    Related
    ENSSANP00000025853.1, ENSSANT00000027530.1

  2. XM_016458391.1 → XP_016313877.1  probable C-mannosyltransferase DPY19L1 isoform X2

    UniProtKB/TrEMBL
    A0A671LZ90, A0A671M5L1
Nucleotide Protein
Heading Accession and Version

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