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LOC107666416 chondroitin sulfate N-acetylgalactosaminyltransferase 2-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107666416, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107666416
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2-like
See related
Ensembl:ENSSANG00000028719
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107666416 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015552625.1 (705965..712218)

NW_015552625.1Genomic Context describing neighboring genes Neighboring gene heparan-alpha-glucosaminide N-acetyltransferase-like Neighboring gene proto-oncogene tyrosine-protein kinase receptor Ret-like Neighboring gene SEC23-interacting protein-like Neighboring gene mini-chromosome maintenance complex-binding protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015552625.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015552625.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    705965..712218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016457688.1 → XP_016313174.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A671PIL0
    Related
    ENSSANP00000057323.1, ENSSANT00000060997.1
Nucleotide Protein
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