U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

p3h2 prolyl 3-hydroxylase 2 [ Sinocyclocheilus anshuiensis ]

Gene ID: 107655408, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
p3h2
Gene description
prolyl 3-hydroxylase 2
See related
Ensembl:ENSSANG00000020910
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See p3h2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015548254.1 (1129413..1189835, complement)

NW_015548254.1Genomic Context describing neighboring genes Neighboring gene chloride channel CLIC-like 1 Neighboring gene WD repeat domain 47b Neighboring gene claudin-1-like Neighboring gene coiled-coil domain containing 50a

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015548254.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015548254.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    1129413..1189835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016442891.1 → XP_016298377.1  prolyl 3-hydroxylase 2 isoform X2

  2. XM_016442890.1 → XP_016298376.1  prolyl 3-hydroxylase 2 isoform X1

    UniProtKB/TrEMBL
    A0A671N9J7
    Related
    ENSSANP00000041224.1, ENSSANT00000043879.1

  3. XM_016442892.1 → XP_016298378.1  prolyl 3-hydroxylase 2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.