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LOC107653392 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [ Sinocyclocheilus anshuiensis ]

Gene ID: 107653392, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107653392
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
See related
Ensembl:ENSSANG00000033485
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Also known as
st8sia3
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Genomic context

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See LOC107653392 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015548202.1 (974270..985500)

NW_015548202.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRIM17-like Neighboring gene WD repeat domain 7 Neighboring gene one cut domain family member 2-like Neighboring gene ferrochelatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015548202.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015548202.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    974270..985500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016440101.1 → XP_016295587.1  sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

    UniProtKB/TrEMBL
    A0A671QFF0
    Related
    ENSSANP00000067197.1, ENSSANT00000071422.1
Nucleotide Protein
Heading Accession and Version

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