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LOC107639891 uncharacterized protein At1g04910-like [ Arachis ipaensis ]

Gene ID: 107639891, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107639891
Gene description
uncharacterized protein At1g04910-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107639891 in Genome Data Viewer
Location:
chromosome: B05
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B05 NC_029789.2 (93442996..93447984)
100 previous assembly Araip1.0 (GCF_000816755.1) B05 NC_029789.1 (93106417..93107843)

Chromosome B05 - NC_029789.2Genomic Context describing neighboring genes Neighboring gene casein kinase 1-like protein 4 Neighboring gene uncharacterized LOC107643733 Neighboring gene uncharacterized LOC110262912 Neighboring gene uncharacterized LOC107643734

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein At1g04910-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029789.2 Reference Araip1.1

    Range
    93442996..93447984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021124150.1 → XP_020979809.1  uncharacterized protein At1g04910-like

    Conserved Domains (1) summary
    cd11299
    Location:113 → 451
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
Nucleotide Protein
Heading Accession and Version

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