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LOC107639082 galactan beta-1,4-galactosyltransferase GALS3 [ Arachis ipaensis ]

Gene ID: 107639082, updated on 27-Mar-2021

Summary

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Gene symbol
LOC107639082
Gene description
galactan beta-1,4-galactosyltransferase GALS3
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107639082 in Genome Data Viewer
Location:
chromosome: B04
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B04 NC_029788.2 (19745012..19748304, complement)
100 previous assembly Araip1.0 (GCF_000816755.1) B04 NC_029788.1 (19705389..19708690, complement)

Chromosome B04 - NC_029788.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110270559 Neighboring gene uncharacterized LOC107636213 Neighboring gene uncharacterized LOC107639083 Neighboring gene transcription factor TGA2.2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
galactan beta-1,4-galactosyltransferase GALS3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029788.2 Reference Araip1.1

    Range
    19745012..19748304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016342498.2 → XP_016197984.1  galactan beta-1,4-galactosyltransferase GALS3

    Conserved Domains (1) summary
    pfam01697
    Location:258 → 503
    Glyco_transf_92; Glycosyltransferase family 92

RNA

  1. XR_002360818.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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