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LOC107631868 beta-1,3-galactosyltransferase GALT1 [ Arachis ipaensis ]

Gene ID: 107631868, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107631868
Gene description
beta-1,3-galactosyltransferase GALT1
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107631868 in Genome Data Viewer
Location:
chromosome: B03
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B03 NC_029787.2 (127279659..127283753)
100 previous assembly Araip1.0 (GCF_000816755.1) B03 NC_029787.1 (130437164..130441240, complement)

Chromosome B03 - NC_029787.2Genomic Context describing neighboring genes Neighboring gene vacuolar amino acid transporter 1 Neighboring gene uncharacterized LOC110269536 Neighboring gene extracellular ribonuclease LE Neighboring gene myb family transcription factor PHL8 Neighboring gene cyclic dof factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase GALT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029787.2 Reference Araip1.1

    Range
    127279659..127283753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016335440.2 → XP_016190926.1  beta-1,3-galactosyltransferase GALT1

    Conserved Domains (1) summary
    PLN03133
    Location:1 → 637
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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