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LOC107629906 UDP-glycosyltransferase TURAN [ Arachis ipaensis ]

Gene ID: 107629906, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107629906
Gene description
UDP-glycosyltransferase TURAN
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107629906 in Genome Data Viewer
Location:
chromosome: B03
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B03 NC_029787.2 (19778172..19798677)
100 previous assembly Araip1.0 (GCF_000816755.1) B03 NC_029787.1 (19601425..19609038, complement)

Chromosome B03 - NC_029787.2Genomic Context describing neighboring genes Neighboring gene transcription factor MYB14-like Neighboring gene DEAD-box ATP-dependent RNA helicase 52C-like Neighboring gene probable protein phosphatase 2C 76 Neighboring gene uncharacterized LOC107632665 Neighboring gene uncharacterized LOC107632664

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glycosyltransferase TURAN

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029787.2 Reference Araip1.1

    Range
    19778172..19798677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021118350.1 → XP_020974009.1  UDP-glycosyltransferase TURAN isoform X2

    Conserved Domains (1) summary
    PLN02275
    Location:11 → 398
    PLN02275; transferase, transferring glycosyl groups

  2. XM_016332852.2 → XP_016188338.1  UDP-glycosyltransferase TURAN isoform X4

  3. XM_021118351.1 → XP_020974010.1  UDP-glycosyltransferase TURAN isoform X5

    Conserved Domains (1) summary
    PLN02275
    Location:11 → 436
    PLN02275; transferase, transferring glycosyl groups

  4. XM_016332849.2 → XP_016188335.1  UDP-glycosyltransferase TURAN isoform X1

    Conserved Domains (1) summary
    PLN02275
    Location:11 → 435
    PLN02275; transferase, transferring glycosyl groups

  5. XM_016332850.2 → XP_016188336.1  UDP-glycosyltransferase TURAN isoform X3

RNA

  1. XR_002358982.1 RNA Sequence

  2. XR_002358981.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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