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LOC107617870 granule-bound starch synthase 1, chloroplastic/amyloplastic-like [ Arachis ipaensis ]

Gene ID: 107617870, updated on 18-Sep-2024

Summary

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Gene symbol
LOC107617870
Gene description
granule-bound starch synthase 1, chloroplastic/amyloplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107617870 in Genome Data Viewer
Location:
chromosome: B09
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B09 NC_029793.2 (89687298..89691808)
100 previous assembly Araip1.0 (GCF_000816755.1) B09 NC_029793.1 (90368654..90373222, complement)

Chromosome B09 - NC_029793.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107615679 Neighboring gene uncharacterized LOC110266435 Neighboring gene uncharacterized LOC107615677 Neighboring gene uncharacterized LOC107618924

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: granule-bound starch synthase 1, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029793.2 Reference Araip1.1

    Range
    89687298..89691808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021112679.1 → XP_020968338.1  LOW QUALITY PROTEIN: granule-bound starch synthase 1, chloroplastic/amyloplastic-like

    Conserved Domains (1) summary
    cd03791
    Location:88 → 564
    GT1_Glycogen_synthase_DULL1_like; This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family ...
Nucleotide Protein
Heading Accession and Version

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