U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107612837 glucomannan 4-beta-mannosyltransferase 2 [ Arachis ipaensis ]

Gene ID: 107612837, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107612837
Gene description
glucomannan 4-beta-mannosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107612837 in Genome Data Viewer
Location:
chromosome: B08
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B08 NC_029792.2 (4860895..4865698)
100 previous assembly Araip1.0 (GCF_000816755.1) B08 NC_029792.1 (6370937..6375743, complement)

Chromosome B08 - NC_029792.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107614507 Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene histone deacetylase HDT1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glucomannan 4-beta-mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029792.2 Reference Araip1.1

    Range
    4860895..4865698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016314592.2 → XP_016170078.1  glucomannan 4-beta-mannosyltransferase 2

    Conserved Domains (1) summary
    cd06437
    Location:100 → 336
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases