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LOC107612837 glucomannan 4-beta-mannosyltransferase 2 [ Arachis ipaensis ]

Gene ID: 107612837, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107612837
Gene description
glucomannan 4-beta-mannosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107612837 in Genome Data Viewer
Location:
chromosome: B08
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B08 NC_029792.2 (4860895..4865698)
100 previous assembly Araip1.0 (GCF_000816755.1) B08 NC_029792.1 (6370937..6375743, complement)

Chromosome B08 - NC_029792.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107614507 Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene histone deacetylase HDT1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029792.2 Reference Araip1.1

    Range
    4860895..4865698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016314592.2 → XP_016170078.1  glucomannan 4-beta-mannosyltransferase 2

    Conserved Domains (1) summary
    cd06437
    Location:100 → 336
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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