U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107612537 cellulose synthase A catalytic subunit 1 [UDP-forming] [ Arachis ipaensis ]

Gene ID: 107612537, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107612537
Gene description
cellulose synthase A catalytic subunit 1 [UDP-forming]
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107612537 in Genome Data Viewer
Location:
chromosome: B08
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B08 NC_029792.2 (124591476..124597822, complement)
100 previous assembly Araip1.0 (GCF_000816755.1) B08 NC_029792.1 (124136076..124142422, complement)

Chromosome B08 - NC_029792.2Genomic Context describing neighboring genes Neighboring gene F-box/kelch-repeat protein At3g23880-like Neighboring gene F-box/kelch-repeat protein At3g23880-like Neighboring gene protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 Neighboring gene adenine nucleotide transporter BT1, chloroplastic/mitochondrial

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cellulose synthase A catalytic subunit 1 [UDP-forming]

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029792.2 Reference Araip1.1

    Range
    124591476..124597822 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016314228.1 → XP_016169714.1  cellulose synthase A catalytic subunit 1 [UDP-forming]

    Conserved Domains (1) summary
    PLN02400
    Location:1 → 1083
    PLN02400; cellulose synthase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases