U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107595003 VIP36-like protein [ Sinocyclocheilus grahami ]

Gene ID: 107595003, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107595003
Gene description
VIP36-like protein
See related
Ensembl:ENSSGRG00000014010
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107595003 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505374.1 (742101..746738)

NW_015505374.1Genomic Context describing neighboring genes Neighboring gene serine protease HTRA1B-like Neighboring gene uncharacterized LOC107595035 Neighboring gene leukocyte surface antigen CD53-like Neighboring gene serine/threonine-protein kinase A-Raf-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015505374.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505374.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    742101..746738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016285253.1 → XP_016140739.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A672LIN4, A0A672RVT9
    Related
    ENSSGRP00000023735.1, ENSSGRT00000025588.1

  2. XM_016285254.1 → XP_016140740.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A672RVT9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases