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LOC107561547 protein O-mannosyl-transferase 2-like [ Sinocyclocheilus grahami ]

Gene ID: 107561547, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107561547
Gene description
protein O-mannosyl-transferase 2-like
See related
Ensembl:ENSSGRG00000028175
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107561547 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505957.1 (195068..205516, complement)

NW_015505957.1Genomic Context describing neighboring genes Neighboring gene visual system homeobox 2 Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene probable D-tyrosyl-tRNA(Tyr) deacylase 2 Neighboring gene iron-sulfur protein NUBPL-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505957.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein O-mannosyl-transferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505957.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    195068..205516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016246016.1 → XP_016101502.1  LOW QUALITY PROTEIN: protein O-mannosyl-transferase 2-like

    UniProtKB/TrEMBL
    A0A672NYI8
    Related
    ENSSGRP00000053598.1, ENSSGRT00000057274.1
Nucleotide Protein
Heading Accession and Version

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