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LOC107555358 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like [ Sinocyclocheilus grahami ]

Gene ID: 107555358, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107555358
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like
See related
Ensembl:ENSSGRG00000054494
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107555358 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505711.1 (554271..558723)

NW_015505711.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 Neighboring gene rho-related GTP-binding protein RhoE-like Neighboring gene ly6/PLAUR domain-containing protein 6B-like Neighboring gene kinesin heavy chain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505711.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505711.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    554271..558723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016238121.1 → XP_016093607.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X3

    UniProtKB/TrEMBL
    A0A672T9B4, A0A672TAX5
    Related
    ENSSGRP00000110786.1, ENSSGRT00000117681.1

  2. XM_016238119.1 → XP_016093605.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X1

    UniProtKB/TrEMBL
    A0A672T7P6, A0A672TAX5
    Related
    ENSSGRP00000110788.1, ENSSGRT00000117683.1

  3. XM_016238120.1 → XP_016093606.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X2

    UniProtKB/TrEMBL
    A0A672TAX5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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