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PLA2G6 phospholipase A2 group VI [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107519256, updated on 30-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
Locus tag
HJG63_015412
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416295.1 (170059512..170110872, complement)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015494744.1 (3628888..3680356, complement)

NW_023416295.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 8 Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC118613784 Neighboring gene uncharacterized LOC118613785 Neighboring gene MAF bZIP transcription factor F Neighboring gene uncharacterized LOC118613786 Neighboring gene transmembrane protein 184B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416295.1 Reference mRouAeg1.p

    Range
    170059512..170110872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036237477.1 → XP_036093370.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_016161747.2 → XP_016017233.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_016161748.2 → XP_016017234.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_016161749.2 → XP_016017235.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_016161750.2 → XP_016017236.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_036237478.1 → XP_036093371.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  7. XM_016161751.2 → XP_016017237.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JJI7
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA02875
    Location:220 → 413
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_036237480.1 → XP_036093373.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (4) summary
    cd07212
    Location:426 → 739
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)

  9. XM_036237479.1 → XP_036093372.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (4) summary
    cd07212
    Location:426 → 739
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:103 → 183
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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