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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107505578, updated on 30-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Locus tag
HJG63_018539
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416307.1 (71527381..71594326, complement)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015492825.1 (234582..300952, complement)

NW_023416307.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L13-like Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene 5S ribosomal RNA Neighboring gene translation initiation factor IF-2-like Neighboring gene 5S ribosomal RNA Neighboring gene small nucleolar RNA SNORA65 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416307.1 Reference mRouAeg1.p

    Range
    71527381..71594326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036219936.1 → XP_036075829.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A7J8HVL1, A0A7J8HX97
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 330
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_036219937.1 → XP_036075830.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A7J8HX97
    Conserved Domains (1) summary
    pfam00777
    Location:59 → 304
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_016135827.2 → XP_015991313.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A7J8HVL1, A0A7J8HX97
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 330
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_036219938.1 → XP_036075831.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:1 → 186
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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