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LOC107496082 sucrose synthase [ Arachis duranensis ]

Gene ID: 107496082, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107496082
Gene description
sucrose synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 1 NC_029772.3 (87870861..87875246)
101 previous assembly Aradu1.1 (GCF_000817695.2) A01 NC_029772.2 (88926340..88930718)

Chromosome 1 - NC_029772.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit K Neighboring gene kinesin-like protein KIN-7B Neighboring gene uncharacterized LOC110281251 Neighboring gene uncharacterized LOC107496092

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029772.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    87870861..87875246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016117284.3 → XP_015972770.1  sucrose synthase

    UniProtKB/TrEMBL
    A0A6P4DV85
    Conserved Domains (1) summary
    PLN00142
    Location:1 → 806
    PLN00142; sucrose synthase
Nucleotide Protein
Heading Accession and Version

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