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LOC107478222 callose synthase 12-like [ Arachis duranensis ]

Gene ID: 107478222, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107478222
Gene description
callose synthase 12-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107478222 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 3 NC_029774.3 (21581691..21587192)
101 previous assembly Aradu1.1 (GCF_000817695.2) A03 NC_029774.2 (19144560..19150181)

Chromosome 3 - NC_029774.3Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase T2-like Neighboring gene uncharacterized LOC107478223 Neighboring gene small nucleolar RNA J33 Neighboring gene uncharacterized LOC107478126 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029774.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    21581691..21587192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016098361.3 → XP_015953847.1  callose synthase 12-like

    UniProtKB/TrEMBL
    A0A6P4CN33
    Conserved Domains (2) summary
    pfam02364
    Location:875 → 1637
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:162 → 274
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
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