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LOC107475320 protein SLE2 [ Arachis duranensis ]

Gene ID: 107475320, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107475320
Gene description
protein SLE2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107475320 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 2 NC_029773.3 (81877329..81878114, complement)
101 previous assembly Aradu1.1 (GCF_000817695.2) A02 NC_029773.2 (82181195..82182023, complement)

Chromosome 2 - NC_029773.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107475340 Neighboring gene uncharacterized LOC127744979 Neighboring gene protein SLE2 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut. Nagy ED, et al. BMC Genomics, 2012 Sep 11. PMID 22967170, Free PMC Article
  2. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to abscisic acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SLE2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029773.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    81877329..81878114 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016094943.3 → XP_015950429.1  protein SLE2

    UniProtKB/TrEMBL
    A0A6P4CF36
    Conserved Domains (1) summary
    pfam00477
    Location:1 → 89
    LEA_5; Small hydrophilic plant seed protein
Nucleotide Protein
Heading Accession and Version

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