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LOC107471575 peptidyl serine alpha-galactosyltransferase [ Arachis duranensis ]

Gene ID: 107471575, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107471575
Gene description
peptidyl serine alpha-galactosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107471575 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 10 NC_029781.3 (102591633..102598666, complement)
101 previous assembly Aradu1.1 (GCF_000817695.2) A10 NC_029781.2 (105779001..105786062, complement)

Chromosome 10 - NC_029781.3Genomic Context describing neighboring genes Neighboring gene putative disease resistance RPP13-like protein 1 Neighboring gene uncharacterized LOC107471559 Neighboring gene protein WVD2-like 7 Neighboring gene probable carboxylesterase 11 Neighboring gene uncharacterized LOC107471582

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidyl serine alpha-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029781.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    102591633..102598666 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016091063.3 → XP_015946549.1  peptidyl serine alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P4C7I9
Nucleotide Protein
Heading Accession and Version

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