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LOC107470908 UDP-arabinopyranose mutase 3 [ Arachis duranensis ]

Gene ID: 107470908, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107470908
Gene description
UDP-arabinopyranose mutase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107470908 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 10 NC_029781.3 (94262744..94265698, complement)
101 previous assembly Aradu1.1 (GCF_000817695.2) A10 NC_029781.2 (97390924..97394066, complement)

Chromosome 10 - NC_029781.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107470905 Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene uncharacterized LOC110276141 Neighboring gene COBRA-like protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut. Nagy ED, et al. BMC Genomics, 2012 Sep 11. PMID 22967170, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029781.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    94262744..94265698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016090318.3 → XP_015945804.1  UDP-arabinopyranose mutase 3

    UniProtKB/TrEMBL
    A0A6P4BTS4
    Conserved Domains (1) summary
    PLN03180
    Location:27 → 361
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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