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LOC107460389 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 [ Arachis duranensis ]

Gene ID: 107460389, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107460389
Gene description
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC107460389 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 8 NC_029779.3 (6203276..6207091)
101 previous assembly Aradu1.1 (GCF_000817695.2) A08 NC_029779.2 (6505351..6509402)

Chromosome 8 - NC_029779.3Genomic Context describing neighboring genes Neighboring gene phosphatidate phosphatase PAH1 Neighboring gene protein TIC 22, chloroplastic Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 Neighboring gene photosystem I chlorophyll a/b-binding protein 5, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029779.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    6203276..6207091
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016078747.3 → XP_015934233.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2

    UniProtKB/TrEMBL
    A0A6P4B5F4
    Conserved Domains (1) summary
    cd02537
    Location:294 → 538
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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