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LOC107441085 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [ Parasteatoda tepidariorum (common house spider) ]

Gene ID: 107441085, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107441085
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A
See related
EnsemblRapid:LOC107441085
Gene type
protein coding
RefSeq status
MODEL
Organism
Parasteatoda tepidariorum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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Genomic context

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See LOC107441085 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024969676.1 (1831959..1903062, complement)
100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015469486.1 (194233..261379)

NW_024969676.1Genomic Context describing neighboring genes Neighboring gene flavin-containing monooxygenase 5-like Neighboring gene uncharacterized LOC122268783 Neighboring gene muscle calcium channel subunit alpha-1 Neighboring gene RtcB RNA ligase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly. Kono N, et al. Mol Ecol Resour, 2016 May. PMID 26561354
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A
Names
putative alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ptep_3.0

Genomic

  1. NW_024969676.1 Reference Ptep_3.0

    Range
    1831959..1903062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016054228.2 → XP_015909714.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A

    Related
    XP_015909714.1, XM_016054228.2
    Conserved Domains (1) summary
    pfam04666
    Location:144 → 423
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases