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LOC107429096 rhamnogalacturonan I rhamnosyltransferase 1-like [ Ziziphus jujuba (common jujube) ]

Gene ID: 107429096, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107429096
Gene description
rhamnogalacturonan I rhamnosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ziziphus jujuba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Genomic context

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See LOC107429096 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM3175591v1 (GCF_031755915.1) 12 NC_083390.1 (16593109..16597224)
101 previous assembly ZizJuj_1.1 (GCF_000826755.1) 10 NC_029688.1 (14085163..14089559, complement)

Chromosome 12 - NC_083390.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107429092 Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1 Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1 Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031755915.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3175591v1 Primary Assembly

Genomic

  1. NC_083390.1 Reference ASM3175591v1 Primary Assembly

    Range
    16593109..16597224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048462256.2 → XP_048318213.2  rhamnogalacturonan I rhamnosyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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