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LOC107429083 probable UDP-arabinopyranose mutase 1 [ Ziziphus jujuba (common jujube) ]

Gene ID: 107429083, updated on 31-Jan-2024

Summary

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Gene symbol
LOC107429083
Gene description
probable UDP-arabinopyranose mutase 1
Locus tag
FEM48_Zijuj10G0101400
Gene type
protein coding
RefSeq status
MODEL
Organism
Ziziphus jujuba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Genomic context

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See LOC107429083 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM3175591v1 (GCF_031755915.1) 12 NC_083390.1 (16133576..16136322)
101 previous assembly ZizJuj_1.1 (GCF_000826755.1) 10 NC_029688.1 (13967742..13970428, complement)

Chromosome 12 - NC_083390.1Genomic Context describing neighboring genes Neighboring gene PI-PLC X domain-containing protein At5g67130 Neighboring gene cytochrome P450 85A Neighboring gene uncharacterized LOC107429040 Neighboring gene transfer RNA aspartic acid (anticodon GUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 1
Names
alpha-1,4-glucan-protein synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031755915.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3175591v1 Primary Assembly

Genomic

  1. NC_083390.1 Reference ASM3175591v1 Primary Assembly

    Range
    16133576..16136322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016039734.4 → XP_015895220.1  probable UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A6P4AEG0, A0A978UMS0, A0A978VI60
    Conserved Domains (1) summary
    PLN03180
    Location:2 → 346
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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