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LOC107405689 probable galacturonosyltransferase 6 [ Ziziphus jujuba (common jujube) ]

Gene ID: 107405689, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107405689
Gene description
probable galacturonosyltransferase 6
Locus tag
FEM48_Zijuj09G0049000
Gene type
protein coding
RefSeq status
MODEL
Organism
Ziziphus jujuba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Genomic context

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See LOC107405689 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM3175591v1 (GCF_031755915.1) 9 NC_083387.1 (4287862..4292892, complement)
101 previous assembly ZizJuj_1.1 (GCF_000826755.1) Unplaced Scaffold NW_015453989.1 (47171..52149)

Chromosome 9 - NC_083387.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase III subunit rpc8 Neighboring gene photosystem II reaction center W protein, chloroplastic Neighboring gene magnesium transporter MRS2-I Neighboring gene E3 ubiquitin protein ligase DRIP2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031755915.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3175591v1 Primary Assembly

Genomic

  1. NC_083387.1 Reference ASM3175591v1 Primary Assembly

    Range
    4287862..4292892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025069174.3 → XP_024924942.3  probable galacturonosyltransferase 6

Nucleotide Protein
Heading Accession and Version

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