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p3h2 prolyl 3-hydroxylase 2 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107392670, updated on 6-Jun-2024

Summary

Gene symbol
p3h2
Gene description
prolyl 3-hydroxylase 2
See related
Ensembl:ENSNFUG00015025422
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
LEPREL1
Orthologs
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Genomic context

See p3h2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539929.1 (20031308..20109322)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr17 NC_029665.1 (22310913..22393206)

NW_026539929.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 50a Neighboring gene claudin-19 Neighboring gene coiled-coil domain containing 181 Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
prolyl 3-hydroxylase 2
Names
leprecan-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539929.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    20031308..20109322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015970570.2XP_015826056.2  prolyl 3-hydroxylase 2 isoform X1

    UniProtKB/TrEMBL
    A0A9D3BCD5
  2. XM_015970571.2XP_015826057.2  prolyl 3-hydroxylase 2 isoform X2

    UniProtKB/TrEMBL
    A0A1A8AP82