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cpox coproporphyrinogen oxidase [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107392667, updated on 6-Jun-2024

Summary

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Gene symbol
cpox
Gene description
coproporphyrinogen oxidase
See related
Ensembl:ENSNFUG00015025424
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539929.1 (20116851..20122399)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr17 NC_029665.1 (22400336..22405719)

NW_026539929.1Genomic Context describing neighboring genes Neighboring gene prolyl 3-hydroxylase 2 Neighboring gene coiled-coil domain containing 181 Neighboring gene proline rich Gla (G-carboxyglutamic acid) 1 Neighboring gene transmembrane protein 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coproporphyrinogen oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protoporphyrinogen IX biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539929.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    20116851..20122399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015970565.2 → XP_015826051.2  oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial

    UniProtKB/TrEMBL
    A0A1A8B3Z4, A0A1A8USN2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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