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tstd3 thiosulfate sulfurtransferase like domain containing 3 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107378833, updated on 12-Sep-2024

Summary

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Gene symbol
tstd3
Gene description
thiosulfate sulfurtransferase like domain containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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See tstd3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539917.1 (32324000..32327599, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr05 NC_029653.1 (36401680..36405752, complement)

NW_026539917.1Genomic Context describing neighboring genes Neighboring gene PR domain containing 13 Neighboring gene uncharacterized LOC107378834 Neighboring gene ubiquitin specific peptidase 45 Neighboring gene uncharacterized LOC129163358

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiosulfate sulfurtransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3
Names
thiosulfate sulfurtransferase (rhodanese)-like domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539917.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    32324000..32327599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015949252.2 → XP_015804738.1  thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3

    UniProtKB/TrEMBL
    A0A1A8A4M9, A0A8C6NXX7
    Conserved Domains (1) summary
    cl00125
    Location:62 → 167
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
Nucleotide Protein
Heading Accession and Version

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