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dysf dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107376906, updated on 14-Mar-2024

Summary

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Gene symbol
dysf
Gene description
dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)
See related
Ensembl:ENSNFUG00015000427
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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See dysf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
57
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539925.1 (6844682..6961856)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr04 NC_029652.1 (6979880..7172602)

NW_026539925.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107376903 Neighboring gene uncharacterized LOC107376905 Neighboring gene paraneoplastic antigen Ma2 homolog Neighboring gene cytochrome P450 26B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539925.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    6844682..6961856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015946228.2 → XP_015801714.2  dysferlin isoform X1

  2. XM_015946229.2 → XP_015801715.2  dysferlin isoform X2

  3. XM_015946232.2 → XP_015801718.2  dysferlin isoform X4

  4. XM_015946231.2 → XP_015801717.2  dysferlin isoform X3

  5. XM_015946233.2 → XP_015801719.2  dysferlin isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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