U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107359579 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial [ Tetranychus urticae (two-spotted spider mite) ]

Gene ID: 107359579, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107359579
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Tetranychus urticae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107359579 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM23943v1 (GCF_000239435.1) Unplaced Scaffold NW_015449933.1 (2572997..2574304)

NW_015449933.1Genomic Context describing neighboring genes Neighboring gene DOT1 like histone lysine methyltransferase grappa Neighboring gene formin-like protein CG32138 Neighboring gene histone H3.3 Neighboring gene mannosyl-oligosaccharide glucosidase-like Neighboring gene ras association domain-containing protein 1 Neighboring gene short-chain dehydrogenase/reductase family 16C member 6 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015449933 Unplaced Scaffold Reference ASM23943v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Tetranychus urticae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM23943v1 Primary Assembly

Genomic

  1. NW_015449933.1 Reference ASM23943v1 Primary Assembly

    Range
    2572997..2574304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015926075.2 → XP_015781561.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

    UniProtKB/TrEMBL
    T1K2H4
    Conserved Domains (1) summary
    pfam10229
    Location:53 → 266
    DUF2246; Uncharacterized conserved protein (DUF2246)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases