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LOC107341811 exostosin-3-like [ Acropora digitifera ]

Gene ID: 107341811, updated on 2-Nov-2023

Summary

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Gene symbol
LOC107341811
Gene description
exostosin-3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acropora digitifera
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora
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Genomic context

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See LOC107341811 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Adig_1.1 (GCF_000222465.1) Unplaced Scaffold NW_015441228.1 (438014..442281)

NW_015441228.1Genomic Context describing neighboring genes Neighboring gene phosphatidate phosphatase LPIN3-like Neighboring gene zinc finger protein 395-like Neighboring gene beta-1,3-galactosyltransferase 1-like Neighboring gene beta-1,3-galactosyltransferase 5-like Neighboring gene retinoschisin-like Neighboring gene EGF-like repeat and discoidin I-like domain-containing protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015441228.1 Unplaced Scaffold Reference Adig_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acropora digitifera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Adig_1.1 Primary Assembly

Genomic

  1. NW_015441228.1 Reference Adig_1.1 Primary Assembly

    Range
    438014..442281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015907281.1 → XP_015762767.1  exostosin-3-like

    Conserved Domains (2) summary
    pfam03016
    Location:187 → 477
    Exostosin; Exostosin family
    pfam09258
    Location:631 → 727
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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