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LMAN2 lectin, mannose binding 2 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107320473, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2
Gene description
lectin, mannose binding 2
See related
Ensembl:ENSCJPG00005009012
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See LMAN2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 13 NC_029528.1 (11914295..11918777, complement)

Chromosome 13 - NC_029528.1Genomic Context describing neighboring genes Neighboring gene NEDD4 binding protein 3 Neighboring gene beta-1,4-galactosyltransferase 7 Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene regulator of G protein signaling 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029528.1 Chromosome 13 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicular integral-membrane protein VIP36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029528.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    11914295..11918777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015876380.2 → XP_015731866.1  vesicular integral-membrane protein VIP36

    UniProtKB/TrEMBL
    A0A8C2Y9P7
    Related
    ENSCJPP00005010321.1, ENSCJPT00005015318.1
    Conserved Domains (1) summary
    cd06901
    Location:38 → 286
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain
Nucleotide Protein
Heading Accession and Version

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