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DERA deoxyribose-phosphate aldolase [ Coturnix japonica (Japanese quail) ]

Gene ID: 107316387, updated on 14-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSCJPG00005002923
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 1 NC_029516.1 (57777555..57834300)

Chromosome 1 - NC_029516.1Genomic Context describing neighboring genes Neighboring gene EGFR pathway substrate 8, signaling adaptor Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene solute carrier family 15 member 5 Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029516.1 Chromosome 1 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029516.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    57777555..57834300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015867785.2 → XP_015723271.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    A0A8C2SR80
    Related
    ENSCJPP00005002602.1, ENSCJPT00005004858.1
    Conserved Domains (1) summary
    cd00959
    Location:50 → 278
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_015867793.2 → XP_015723279.1  deoxyribose-phosphate aldolase isoform X3

    Conserved Domains (1) summary
    cl21457
    Location:50 → 235
    TIM_phosphate_binding; TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate ...

  3. XM_032445895.1 → XP_032301786.1  deoxyribose-phosphate aldolase isoform X2

    Conserved Domains (1) summary
    cd00959
    Location:50 → 260
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

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