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LOC107313986 octopamine receptor-like [ Coturnix japonica (Japanese quail) ]

Gene ID: 107313986, updated on 14-Dec-2023

Summary

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Gene symbol
LOC107313986
Gene description
octopamine receptor-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
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Genomic context

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See LOC107313986 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 4 NC_029519.1 (77970765..77978749)

Chromosome 4 - NC_029519.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107313848 Neighboring gene forkhead box I3 Neighboring gene uncharacterized LOC107313853 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 3 Neighboring gene ribose 5-phosphate isomerase A Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029519.1 Chromosome 4 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
octopamine receptor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029519.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    77970765..77978749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015862790.2 → XP_015718276.1  octopamine receptor-like

    UniProtKB/TrEMBL
    A0A8C2T5H5
    Conserved Domains (2) summary
    pfam00001
    Location:50 → 313
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:46 → 328
    7tm_4; Olfactory receptor

  2. XM_015862789.2 → XP_015718275.1  octopamine receptor-like

    UniProtKB/TrEMBL
    A0A8C2T5H5
    Conserved Domains (2) summary
    pfam00001
    Location:50 → 313
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:46 → 328
    7tm_4; Olfactory receptor

  3. XM_015862791.2 → XP_015718277.1  octopamine receptor-like

    UniProtKB/TrEMBL
    A0A8C2T5H5
    Conserved Domains (2) summary
    pfam00001
    Location:50 → 313
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:46 → 328
    7tm_4; Olfactory receptor
Nucleotide Protein
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