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SPP1 secreted phosphoprotein 1 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107313466, updated on 14-Mar-2024

Summary

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Gene symbol
SPP1
Gene description
secreted phosphoprotein 1
See related
Ensembl:ENSCJPG00005010001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Also known as
OPN
Orthologs
human mouse all
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Genomic context

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See SPP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 4 NC_029519.1 (40629560..40632624, complement)

Chromosome 4 - NC_029519.1Genomic Context describing neighboring genes Neighboring gene protein kinase cGMP-dependent 2 Neighboring gene polycystin 2, transient receptor potential cation channel Neighboring gene ovocleidin-116-like Neighboring gene integrin binding sialoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029519.1 Chromosome 4 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ambivalent Role of Proline Residues in an Intrinsically Disordered Protein: From Disorder Promoters to Compaction Facilitators. Mateos B, et al. J Mol Biol, 2020 Apr 17. PMID 31794728
  2. Suppression in transformed avian fibroblasts of a gene (CO6) encoding a membrane protein related to mammalian potassium channel regulatory subunits. Oberst C, et al. Oncogene, 1997 Mar 6. PMID 9070660
  3. Cooperative cell transformation by Myc/Mil(Raf) involves induction of AP-1 and activation of genes implicated in cell motility and metastasis. Hartl M, et al. Oncogene, 2006 Jul 6. PMID 16491116

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The Ambivalent Role of Proline Residues in an Intrinsically Disordered Protein: From Disorder Promoters to Compaction Facilitators.
    Title: The Ambivalent Role of Proline Residues in an Intrinsically Disordered Protein: From Disorder Promoters to Compaction Facilitators.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in osteoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
osteopontin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323234.1 → NP_001310163.1  osteopontin precursor

    Status: PROVISIONAL

    Source sequence(s)
    AF239805
    UniProtKB/TrEMBL
    A0A8C2TC92, Q9I832
    Related
    ENSCJPP00005011644.1, ENSCJPT00005017017.1
    Conserved Domains (1) summary
    cl02425
    Location:17 → 264
    Osteopontin; Osteopontin

RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029519.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    40629560..40632624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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