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ACSL4 acyl-CoA synthetase long chain family member 4 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107312770, updated on 14-Mar-2024

Summary

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Gene symbol
ACSL4
Gene description
acyl-CoA synthetase long chain family member 4
See related
Ensembl:ENSCJPG00005017219
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 4 NC_029519.1 (12926695..12959317)

Chromosome 4 - NC_029519.1Genomic Context describing neighboring genes Neighboring gene chordin like 1 Neighboring gene AMMECR nuclear protein 1 Neighboring gene uncharacterized LOC107312777 Neighboring gene transmembrane protein 164 Neighboring gene uncharacterized LOC107312776 Neighboring gene nuclear transport factor 2 like export factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029519.1 Chromosome 4 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029519.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    12926695..12959317
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015860455.2 → XP_015715941.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:75 → 708
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  2. XM_015860458.2 → XP_015715944.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2U1V0, A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:34 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  3. XM_015860461.2 → XP_015715947.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2U1V0, A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:34 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  4. XM_015860454.2 → XP_015715940.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:75 → 708
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  5. XM_015860456.2 → XP_015715942.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2U422
    Related
    ENSCJPP00005021524.1, ENSCJPT00005029549.1
    Conserved Domains (2) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:75 → 708
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  6. XM_015860457.2 → XP_015715943.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2U1V0, A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:34 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  7. XM_015860459.2 → XP_015715945.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2U1V0, A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:34 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  8. XM_015860460.2 → XP_015715946.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2U1V0, A0A8C2U422
    Related
    ENSCJPP00005021523.1, ENSCJPT00005029548.1
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:34 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  9. XM_015860462.2 → XP_015715948.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2U1V0, A0A8C2U422
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:34 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein
Nucleotide Protein
Heading Accession and Version

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