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KDSR 3-ketodihydrosphingosine reductase [ Coturnix japonica (Japanese quail) ]

Gene ID: 107309654, updated on 14-Mar-2024

Summary

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Gene symbol
KDSR
Gene description
3-ketodihydrosphingosine reductase
See related
Ensembl:ENSCJPG00005016774
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See KDSR in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 2 NC_029517.1 (63087340..63107552, complement)

Chromosome 2 - NC_029517.1Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein 3-like Neighboring gene uncharacterized LOC107309651 Neighboring gene BCL2 apoptosis regulator Neighboring gene vacuolar protein sorting 4 homolog B Neighboring gene uncharacterized LOC116652901 Neighboring gene serpin family B member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029517.1 Chromosome 2 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-dehydrosphinganine reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3-keto-sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketodihydrosphingosine reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029517.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    63087340..63107552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015854624.2 → XP_015710110.1  3-ketodihydrosphingosine reductase isoform X1

    UniProtKB/TrEMBL
    A0A8C2U490
    Related
    ENSCJPP00005020919.1, ENSCJPT00005028780.1
    Conserved Domains (2) summary
    cd08939
    Location:32 → 268
    KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR
    pfam00106
    Location:34 → 232
    adh_short; short chain dehydrogenase

  2. XM_015854626.2 → XP_015710112.1  3-ketodihydrosphingosine reductase isoform X2

    UniProtKB/TrEMBL
    A0A8C2U490
    Conserved Domains (2) summary
    cd08939
    Location:17 → 251
    KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR
    pfam00106
    Location:18 → 215
    adh_short; short chain dehydrogenase
Nucleotide Protein
Heading Accession and Version

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