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HS6ST3 heparan sulfate 6-O-sulfotransferase 3 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107308011, updated on 14-Mar-2024

Summary

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Gene symbol
HS6ST3
Gene description
heparan sulfate 6-O-sulfotransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See HS6ST3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 1 NC_029516.1 (131004926..131269281, complement)

Chromosome 1 - NC_029516.1Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate receptor 1-like Neighboring gene oxoglutarate receptor 1 Neighboring gene uncharacterized LOC116652752 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 2 Neighboring gene transfer RNA phenylalanine (anticodon GAA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029516.1 Chromosome 1 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029516.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    131004926..131269281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015851553.2 → XP_015707039.1  heparan-sulfate 6-O-sulfotransferase 3

    Conserved Domains (1) summary
    pfam03567
    Location:88 → 354
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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