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LOC107299630 polypeptide N-acetylgalactosaminyltransferase 4-like [ Protobothrops mucrosquamatus ]

Gene ID: 107299630, updated on 22-Oct-2023

Summary

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Gene symbol
LOC107299630
Gene description
polypeptide N-acetylgalactosaminyltransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
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Genomic context

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See LOC107299630 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015391069.1 (50142..51875)

NW_015391069.1Genomic Context describing neighboring genes Neighboring gene EH domain-containing protein 3 pseudogene Neighboring gene HIG1 domain family member 1A, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015391069 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015391069.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    50142..51875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015828991.1 → XP_015684477.1  polypeptide N-acetylgalactosaminyltransferase 4-like

    Conserved Domains (4) summary
    cd02510
    Location:137 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:133 → 371
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:445 → 575
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:445 → 573
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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