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OXCT1 3-oxoacid CoA-transferase 1 [ Protobothrops mucrosquamatus ]

Gene ID: 107295926, updated on 14-Mar-2024

Summary

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Gene symbol
OXCT1
Gene description
3-oxoacid CoA-transferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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See OXCT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015388631.1 (40846..102583)

NW_015388631.1Genomic Context describing neighboring genes Neighboring gene F-box protein 4 Neighboring gene RAB7A interacting MON1-CCZ1 complex subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015388631 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinyl-CoA:3-oxo-acid CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ketone body catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015388631.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    40846..102583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015825260.1 → XP_015680746.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial

    Conserved Domains (3) summary
    TIGR02428
    Location:311 → 519
    pcaJ_scoB_fam; 3-oxoacid CoA-transferase, B subunit
    COG1788
    Location:59 → 283
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    COG4670
    Location:56 → 526
    YdiF; Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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