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SMC3 structural maintenance of chromosomes 3 [ Protobothrops mucrosquamatus ]

Gene ID: 107289368, updated on 14-Mar-2024

Summary

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Gene symbol
SMC3
Gene description
structural maintenance of chromosomes 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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See SMC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386968.1 (310058..340458)

NW_015386968.1Genomic Context describing neighboring genes Neighboring gene transcription factor A, mitochondrial Neighboring gene dual specificity phosphatase 5 Neighboring gene RNA binding motif protein 20 Neighboring gene programmed cell death 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015386968 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cohesin loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structural maintenance of chromosomes protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015386968.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    310058..340458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015818110.1 → XP_015673596.1  structural maintenance of chromosomes protein 3

    Conserved Domains (7) summary
    cd03272
    Location:3 → 158
    ABC_SMC3_euk; ATP-binding cassette domain of eukaryotic SMC3 proteins
    smart00968
    Location:530 → 642
    SMC_hinge; SMC proteins Flexible Hinge Domain
    COG1196
    Location:1 → 1194
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl00459
    Location:700 → 826
    MIT_CorA-like; metal ion transporter CorA-like divalent cation transporter superfamily
    cl12013
    Location:388 → 482
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    cl21455
    Location:1105 → 1199
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl23720
    Location:222 → 337
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

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