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LAMC2 laminin subunit gamma 2 [ Protobothrops mucrosquamatus ]

Gene ID: 107284986, updated on 14-Mar-2024

Summary

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Gene symbol
LAMC2
Gene description
laminin subunit gamma 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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See LAMC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386506.1 (233980..281551, complement)

NW_015386506.1Genomic Context describing neighboring genes Neighboring gene SMG7 nonsense mediated mRNA decay factor Neighboring gene nicotinamide nucleotide adenylyltransferase 2 Neighboring gene laminin subunit gamma 1 Neighboring gene SHC binding and spindle associated 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015386506 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit gamma-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015386506.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    233980..281551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015813125.1 → XP_015668611.1  laminin subunit gamma-2

    Conserved Domains (7) summary
    smart00180
    Location:85 → 129
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG0840
    Location:743 → 1128
    Tar; Methyl-accepting chemotaxis protein [Cell motility, Signal transduction mechanisms]
    cd00185
    Location:445 → 481
    TNFRSF; CRD2 [structural motif]
    pfam00052
    Location:250 → 370
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:140 → 185
    Laminin_EGF; Laminin EGF domain
    cl00144
    Location:814 → 951
    Tar_Tsr_LBD; ligand binding domain of Tar- and Tsr-related chemoreceptors
    cl22855
    Location:430 → 517
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
Nucleotide Protein
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