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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Cephus cinctus (wheat stem sawfly) ]

Gene ID: 107271160, updated on 10-Oct-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Cephus cinctus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Cephoidea; Cephidae; Cephus
Orthologs
fruit fly honey bee all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Ccin1 (GCF_000341935.1) Unplaced Scaffold NW_014333493.1 (62973..67515)

NW_014333493.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim29 Neighboring gene 1,4-alpha-glucan-branching enzyme Neighboring gene AMP-activated protein kinase alpha subunit Neighboring gene Crk proto-oncogene, adaptor protein Neighboring gene carboxypeptidase N subunit 2 Neighboring gene integral membrane protein GPR155 homolog anchor Neighboring gene Elongator complex protein 5 Neighboring gene Acyl-CoA oxidase 3 Neighboring gene beta-1,3-glucosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014333493 Unplaced Scaffold Reference Ccin1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
congested-like trachea protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cephus cinctus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ccin1 Primary Assembly

Genomic

  1. NW_014333493.1 Reference Ccin1 Primary Assembly

    Range
    62973..67515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015746821.2 → XP_015602307.1  congested-like trachea protein

    UniProtKB/TrEMBL
    A0AAJ7FPU8
    Conserved Domains (2) summary
    PTZ00169
    Location:1 → 271
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:109 → 195
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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