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LOC107267355 prolyl 3-hydroxylase 2 [ Cephus cinctus (wheat stem sawfly) ]

Gene ID: 107267355, updated on 1-Oct-2024

Summary

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Gene symbol
LOC107267355
Gene description
prolyl 3-hydroxylase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cephus cinctus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Cephoidea; Cephidae; Cephus
Orthologs
honey bee all
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Genomic context

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See LOC107267355 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Ccin1 (GCF_000341935.1) Unplaced Scaffold NW_014333085.1 (299959..304662, complement)

NW_014333085.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107267356 Neighboring gene mucin-6 Neighboring gene RNA polymerase III subunit G Neighboring gene Diphthamide biosynthesis 3 Neighboring gene F-BAR domain only protein 2 Neighboring gene serine/threonine-protein kinase Nek5 Neighboring gene uncharacterized LOC107267362 Neighboring gene microtubule-associated serine/threonine (MAST) protein kinase dop

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014333085 Unplaced Scaffold Reference Ccin1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cephus cinctus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ccin1 Primary Assembly

Genomic

  1. NW_014333085.1 Reference Ccin1 Primary Assembly

    Range
    299959..304662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015738947.2 → XP_015594433.1  prolyl 3-hydroxylase 2

    UniProtKB/TrEMBL
    A0AAJ7BUA6
    Conserved Domains (1) summary
    smart00702
    Location:542 → 690
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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