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LOC107262651 beta-1,4-xylosyltransferase IRX14 [ Ricinus communis (castor bean) ]

Gene ID: 107262651, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107262651
Gene description
beta-1,4-xylosyltransferase IRX14
Locus tag
RCOM_1152890
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC107262651 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (3511369..3516573)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_003004704.1 (5..1192, complement)

Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like Neighboring gene probable WRKY transcription factor 15 Neighboring gene cysteine proteinase COT44 Neighboring gene UPF0481 protein At3g47200

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-xylosyltransferase IRX14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063262.1 Reference ASM1957865v1

    Range
    3511369..3516573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048377261.1 → XP_048233218.1  beta-1,4-xylosyltransferase IRX14

Nucleotide Protein
Heading Accession and Version

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